Publications

221. Michalak, D.J., Xu, S., Lowery, T.J., Crawford, C.W., Ledbetter, M., Wemmer, D.E., Budker, D., Pines, A. “Relaxivity of Gadolinium Complexes Detected by Atomic Magnetometry” Mag Res Med. (2011).
220. Wickliffe, K.E., Lorenz, S., Wemmer, D.E., Kuriyan, J., Rape, M. “The mechanism of linkage-specific ubiquitin chain elongation by a single-subunit E2” Cell 144, 769-81 (2011).
219. Hernandez, J.A., Phillips, A.H., Erbil, K.W., Zhao, D., Zeymer, C., Pelton, J.G., Wemmer, D.E., Rubio, L.M. “Nitrogenase recruits a SAM (Sterile Alpha Motif) interaction domain: cofactor insertion involves metallocluster-binding and SAM-interaction domains” J Biol Chem. 286, 6321-28 (2011).
218. Damo, S.M., Phillips, A.H., Young, A.L., Li, S., Woods, V.L.Jr., Wemmer, D.E. “Probing the Prion Protein Conformation in a Fibril with Hydrogen Exchange”  J.Biol.Chem. 285, 32303-11 (2010).
217. Schilling, F., Schröder, L., Palaniappan, K.K., Zapf, S., Wemmer, D.E., Pines, A. “MRI Thermometry Based on Encapsulated Hyperpolarized Xenon” Chem Phys Chem 11, 3529-33 (2010). 
216. Wetzler, M., Wemmer, D.E. “Facile Dimer Synthesis for DNA-binding Polyamide Ligands” Org. Lett. 12, 3488-90 (2010).
215. Meldrum, T., Schröder, L., Denger, P., Wemmer, D.E., Pines, A. “Xenon-based Molecular Sensors in Lipid Suspensions” J. Magn. Res. 205, 242-46 (2010).
214. Kim, K.-S., Pelton, J.G., Andersen, U., Kustu, S. and Wemmer, D.E. “The Rut pathway for pyrimidine degradation: Novel chemistry and toxicity problems” J. Bact. 192, 4089-102 (2010). 
213. Meldrum, T., Seim, K.L., Bajaj, V.S., Palaniappan, K., Wu, W., Francis, M.B., Wemmer, D.E., Pines, A. “A Xenon-based Molecular Sensor Assembled on an MS2 Viral Capsid Scaffold”  J.Am.Chem.Soc. 132, 5936-37 (2010).
212. Sterling, H.J., Batchelor, J.D., Wemmer, D.E. and Williams, E.R. “Electrospray Ionization Mass Spectrometery of a Non-Covalent Protein Complex with Essential Salts via Buffer Loading” J. Am. Soc. Mass. Spec. 21, 1045-49 (2010).
211. Cetinkol, O.P., Dibble, D.C., Cheng, C., Kent, M.S., Knierim, B., Auer, M., Wemmer, D.E., Pelton, J.G., Melnichenko, Y.B., Ralph, J., Simmons, B.A. and Holmes, B.M. “Understanding the Impact of Ionic Liquid Pretreatment on Eucalyptus”  Biofuels 1, 33-46 (2010).
210. Erbil, W.K., Price, M.S., Wemmer, D.E. and Marletta, M.A. “A structural basis for H-NOX signaling by trapping a kinase inhibitory conformation of the H-NOX from S.oneidensis” Proc.Natl.Acad.Sci.USA 106, 19753-60 (2009).
209. Inwood, W., Hall, J. Kim, K.-S., Demirkahyan, L., Wemmer, D.E., Zgurskaya, H., Kustu, S. “Epistatic Effects of the Protease/Chaperone HflB on Soe Damaged Froms of the Escherichia coli Ammonium Channel AmtB”  Genetics 183, 1327-1340 (2009).
208. Batchelor, J.D., Sterling, H.J., Hong, E., Williams, E.R., Wemmer, D.E. “Receiver domains control the active state stoichiometry of Aquifex aeolicus s54 activator NtrC4, as revealed by electrospray mass spectrometry” J. Mol. Biol. 393, 634-43 (2009).
207. Jura, N., Endres, N.F., Engel, K., Deindl, S., Das, R., Lamers, M.H., Wemmer, D.E., Zhang, X., Kuriyan, J. “Structural coupling between the juxtamembrane segment of the EGF receptor and activation of the catalytic domain” Cell 237, 1293-1307 (2009).
206. Hong, E., Doucleff, M. and Wemmer, D.E. “Structure of the RNA-Polymerase Core Binding Domain of s54 Reveals a Potential Conformational Fracture Point” J. Molec. Biol. 390, 70-82 (2009).
205. Ledbetter, M.P., Crawford, C.W., Pines, A., Wemmer, D.E., Knappe, S., Kitching, J. and Budker, D. “Optical detection of scalar coupling at zero magnetic field”  J Magn Res. 199, 25-29 (2009).
204. Buhrlage, S.J., Bates, C.A., Rowe, S.P., Minter, A.R., Brennan, B.B., Majmudar, C.Y., Wemmer, D.E., Al-Hashimi, H. and Mapp, A.K. “Small molecule transcriptional activation domains interact with endogenous coactivators” ACS Chem Bio 4, 335-344 (2009).
203. Batchelor, J.D., Doucleff, M. Lee, C.J., Matsubara, K., DeCarlo, S., Heideker, J., Lamers, M.H., Pelton, J.G., Wemmer, D.E. “Structure and regulatory mechansim of A. aeolicus NtrC4: variability and evolution in bacterial transcriptional regulation”   J. Molec. Biol. 384, 1058-75 (2008).
202. Schröder, L., Chavez, L., Meldrum, T., Smith, M., Lowery, T.J., Wemmer, D.E. and Pines, A. “Temperature-Controlled Molecular Depolarization Gates in Nuclear Magnetic Resonance” Angew. Chem. Int Ed Engl 47, 4316-20 (2008).
201. Schröder, L., Meldrum, T., Smith, M., Lowery, T.J., Wemmer, D.E. and Pines, A. “Temperature response of 129Xe depolarization transfer and application for unltra-sensitive NMR detection” Phys. Rev. Letters. 100: 257603 (2008)
200. Fawzi, N.L., Phillips, A., Ruscio, J.Z., Doucleff, M., Wemmer, D.E. and Head-Gordon, T. “Structure and Dynamics of the Ab21-30 Peptide from the Interplay of NMR Experiments and Molecular Simulations.” J. Am. Chem. Soc. 130, 6145-58 (2008).
199. Baxter, N.J., Blackburn, G.M., Marston, J.P., Hounslow, A.M., Cliff, M.J., Bermel, W., Hollfelder, F., Williams, N.H., Wemmer, D.E., Waltho, J.P. “Anionic Charge is Prioritized over Geometry in Aluminum and Magnesium Fluroide Transition State Analogs of Phosphoryl Transfer Enzymes” J. Am. Chem. Soc. 130, 3952-58 (2008).
198. Lowery, T.J., Pelton, J.G., Chandonia, J.-M., Kim, R., Yokota, H., Wemmer, D.E. “NMR Structure of the N-terminal domain of the replication initiator protein DnaA” J. Str. Funct. Genomics 8, 11-17 (2007).
197. Matsuda, S., Fillo, J.D., Henry, A.A., Wilkens, S.J., Rai, P., Dwyer, T.J., Beierstanger, B.H., Wemmer, D.E., Schultz, P.G., Spraggon, G., Romesberg, F.E., “Efforts Toward Expansion of the Genetic Alphabet: Determinants of Efficient Replication of Unnatural Base Pairs” J. Am. Chem. Soc. 129, 10466-73 (2007).
196. Fraser, J.S., Merlie, J.P. Jr., Echols, N., Weisfield, S.R., Mignot, T., Wemmer, D.E., Zusman, D, Alber, T. “The atypical receiver domain of Myxococcus xanthus FrzS controls social motility without aspartic-acid phosphorylation” Molec Micro. 65, 319-322 (2007).
195. Doucleff, M., Pelton, J.G., Lee, P.S., Nixon, B.T. and Wemmer, D.E. “Structural Basis for DNA Recognition by the Alternative Sigma-Factor, s54”  J. Molec. Biol. 369, 1070-1078 (2007).
194. Chen, B., Doucleff, M., Wemmer, D.E., DeCarlo, S., Huang, H., Nogales, E., Hoover, T.R., Kondrashkina, E., Nixon, B.T. “ATP-ground and transition states of the NtrC1 AAA+ ATPase support binding to its target, s54” Structure 15, 429-440 (2007).
193. Simon, M.D., Feldman, M.E., Maris, A.E. Wemmer, D.E. & Shokat, K.M. “A re-engineered protein-DNA interface: The development, structure and properties of a homeodomain that recognizes an unnatural nucleotide” ACS Chem. Biol. 1, 755-60 (2007).
192. Tang, Y., Hwang, J.S., Wemmer, D.E., Keasling, J.D. “Quantitative Investigation of Central Metabolic Pathways in Shewanella oneidensis MR-1 under Carbon-Limited and Oxygen-Limited Aerobic Conditions using 13C-NMR and GC-MS”  J. Appl. Microbiology 73, 718-29 (2007).
191. Garcia, S., Chavez, L., Lowery, T.J., Han, S.-I., Wemmer, D.E. and Pines, A. “Sensitivity Enhancement by Exchange Mediated Magnetization Transfer of the Xenon Biosensor Signal” J. Mag. Reson. 184, 72-77 (2007).
190. Schröder, L., Lowery, T.J., Hilty, C., Wemmer, D.E. and Pines, A. “Molecular Imaging using a Targeted Magnetic Resonance Hyperpolized Biosensor” Science 314, 449-53 (2006).
189. Pirruccello, M., Sondermann, H., Pelton, J.G., Pellicena, P., Hoelz, A., Chernoff, J., Wemmer, D.E., Kuriyan, J. “A Dimeric Kinase Assembly Underlying Autophosphorylation in the p21 Activated Kinases” J.Molec.Biol. 361, 312-326 (2006).
188. Mynar, J.L., Lowery, T.J., Wemmer, D.E., Pines, A., Fréchet, J.M.J. “Xenon Biosensor Amplification via Dendrimer-Cage Supramolecular Constructs” J.Am.Chem.Soc. 128, 6334-5 (2006).
187. Roberts, A., Pelton, J.G. and Wemmer, D.E. “Structural Studies of MJ1529, an O6-methylguanine-DNA Methyltransferase” Magn. Res. Chem. 44, 71-82 (2006).
186. Lowery, T.J., Garcia, S, Chavez, L., Ruiz, E.J., Wu, T, Brotin, T., King, D.S., Schultz, P.G., Pines, A. and Wemmer, D.E. “Optimization of Xenon Biosensors for Detection of Protein Interactions” ChemBioChem. 7, 65-73 (2006).
185. Lim, K.-H., Nguyen, T.N., Damo, S.M., Mazur, T., Ball, H.L., Prusiner, S.B., Pines, A. and Wemmer, D.E. “Solid State NMR Structural Studies of the Fibril form of a Mutant Mouse Prion Peptide PrP89-143(P101L)”  Solid State NMR 29, 183-190 (2006).
184. Hilty, C., Lowery, T.J., Wemmer, D.E. and Pines, A. “Spectrally Resolved Magnetic Resonance Imaging of a Xenon Biosensor” Angew. Chemie 45, 70-73 (2006).
183. Doucleff, M.C., Malak, L.T., Pelton, J.G. and Wemmer, D.E. “The C-terminal RpoN Domain of s54 Forms an Unpredicted Helix-Turn-Helix Motif Similar to Domains of s70” J. Biol. Chem. 280, 41530-36 (2005).
182. Nixon, B.T., Yennawar, H.P., Doucleff, M., Pelton, J.G., Wemmer, D.E., Kreuger, S. and Kondrashkina, E. “SAS Solution Structures of the Apo and Mg+2/BeF3- bound Receiver Domain of DctD from Sinorhizobium meliloti” Biochem. 44, 13962-69 (2005)
181. Doucleff, M., Chen, B., Maris, A.E., Wemmer, D.E. Kondrashkina E. and Nixon, B.T. “Regulation of AAA+ ATPase Assembly by Two Component Receiver Domains: A Transcription Activation Mechanism that is Conserved in Mesophilic and Extremely Hyperthermophilic Bacteria”, J. Mol. Biol. 353, 242-55 (2005).
180. Choi, Y.-J., Ryu, K.-S., Ko, Y.-M., Chae, Y.-K., Pelton, J.G., Wemmer, D.E., Choi, B.-S. “Biophysical characterization of the interaction domains and mapping of the contact residues in the XPF-ERCC1 complex” J. Biol. Chem. 280, 28644-28652 (2005)
179. Kim, H.-S., Damo, S.M., Lee, S.-Y., Wemmer, D.E. and Klinman, J.P. “Structure and Hydride Transfer Mechanism of a Moderate Thermophilic Dihydrofolate Reductase from B. Stearothermophilus and Comparision with Its Mesophilic and Hyperthermophilic Homologs” Biochem. 44, 11428-11439 (2005).
178. Han, S.I., Garcia, S., Lowery, T.J., Ruiz, E.J., Seeley, J.A., Chavez, L., King, D.S., Wemmer, D.E. & Pines, A. “NMR-Based Bio-Sensing with Optimized Delivery of Polarized 129Xe to Solutions” Analyt Chem. 77, 4008-4012 (2005)
177. Pelton, J.G., Shi, J., Yokota, H., Kim, R. and Wemmer, D.E. “NMR structure of hypothetical protein MG354 from Mycoplasma genetalium” Proteins 61, 666-668 (2005).
176. Lowery, T.J., Doucleff, M., Ruiz, E.J., Rubin, S.M., Pines, A. and Wemmer, D.E. "Distinguishing Multiple Chemotaxis Y Protein Conformations with Laser-Polarized 129Xe NMR" Prot. Sci. 14, 848-855 (2005).
175. Rai, P., Wemmer, D.E., Linn, S. “Preferential binding and structural distortion by Fe2+ at RGGG-containing DNA sequences correlates with enhanced oxidative cleavage at such sequences” Nuc. Acids Res. 33, 497-510 (2005).
174. Roberts, A., Lee, S.-Y., McCullagh, E., Silversmith, R.E. and Wemmer, D.E. “YbiV from E.coli K12 is a HAD Phosphatase” Proteins 58, 790-801 (2005).
173. Spence, M.M., Ruiz, E.J., Rubin, S.M., Lowery, T.J., Winssinger, N., Schultz, P.G., Wemmer, D.E. and Pines, A. “Development of a Functionalized Xenon Biosensor” J.Am.Chem.Soc. 126, 15287-15294 (2004).
172. Lowery, T.J., Rubin, S.M., Ruiz, E.J., Pines, A. and Wemmer, D.E. “Design of a Conformation-Sensitive Xenon-Binding Cavity in the Ribose Binding Protein” Angew. Chemie 43, 6320-6322 (2004).
171. Zhang, Q., Dwyer, T.J., Tsui, V., Case, D.A., Cho, J., Dervan, P.B. and Wemmer, D.E. “NMR Structure of a Cyclic Polyamide-DNA Complex” J.Am.Chem.Soc. 126, 7958-7966 (2004).
170. Shi, J. Pelton, J.G., Cho, H.S. & Wemmer, D.E. “Protein Signal Assignments using Specific Labeling and Cell-free Synthesis” J. Biomol. NMR. 28, 235-247 (2004).
169. Rubin, S.M., Pelton, J.G., Yokota, H., Kim, R. & Wemmer, D.E. “Solution Structure of a Putative Ribosome Binding Protein from Mycoplasma pneumoniae and Comparison to a Distant Homolog” J. Struct. Funct. Gen. 4, 235-243 (2003).
168. Lowery, T.J., Rubin, S.M., Ruiz, E.J., Spence, M.M., Winssinger, N., Schultz, P.G., Pines, A. & Wemmer, D.E. “Applications of laser-polarized 129Xe to biomolecular assays” Magn. Res. Imaging 21, 1235-1239 (2003).
167. Lee, S.Y., de la Torre, A., Yan, D., Kustu, S., Nixon, B.T. & Wemmer, D.E. “Regulation of the transcriptional activator NtrC1: structural studies of the regulatory and AAA+ ATPase Domains” Genes & Development 17, 2552-2563 (2003).
166. Nguyen, T.N. and Wemmer, D.E. “Complete resonance assignments for the Nudix hydrolase DR2356 of Dienococcus radiodurans” J. Biomol. NMR 27, 181-182 (2003).
165. Hastings, C.A., Lee, S.-Y., Cho, H.S., Yan, D. Kustu, S and Wemmer, D.E. “High Resolution Solution Structure of the Beryllofluoride-Activated NtrC Receiver Domain” Biochemistry 42, 9081-9090 (2003).
164. Gardino, A., Volkman, B., Cho, H.S., Lee, S.Y., Wemmer, D.E. and Kern, D. “The NMR Solution Structure of BeF3-Activated Spo0F reveals the conformational switch in a phosphorelay system” J. Mol. Biol. 331, 245-254 (2003).
163. Shin, D.-H., Roberts, A., Jancarik, J., Yokota, H., Kim, R., Wemmer, D.E. & Kim, S.-H. “Crystal structure of a phosphase with a unique substrate binding domain from Thermatoga maritima” Prot. Sci. 12, 1464-1472 (2003).
162. Hawkins, C.A., Baird, E.E., Dervan, P.B. and Wemmer, D.E. “Analysis of Hairpin Polyamide Complexes Having DNA Binding Sites in Close Proximity” J.Am.Chem.Soc. 124, 12689-12696 (2002).
161. Rubin, S.M., Lee, S.-Y., Ruiz, E.J., Pines, A. and Wemmer, D.E. “Detection and Characterization of Xenon Binding Sites in Protein by 129Xe NMR Spectroscopy”  J. Mol. Biol. 322, 425-440 (2002).
160. Lim, K.H., Nguyen, T., Mazur, T., Wemmer, D.E. and Pines, A. “Sensitivity Enhancement in Multiple-Quantum NMR with CPMG Detection”,  J. Magn. Reson. 157, 160-162 (2002).
159. Supekova, L., Pezacki, J.P., Su, A., Loweth, C.J., Reidl, R., Geierstanger, B.H., Massari, E., Murre, C., Wemmer, D.E. and Schultz, P.G. “Genomic Characterization of Polyamide/DNA Interactions in Cells” Chemistry & Biology 9, 821-827 (2002).
158.  Liu, K., Kelly, J.W. and Wemmer, D.E. “A Hydrogen Exchange Study of Suppressor and Pathogenic Variants of Transthyretin” J. Mol. Biol. 320, 821-832 (2002).
157. Wang, W., Cho, H.S., Kim, R., Jancarik, J., Yokota, H., Nguyen, H.T., Grigoriev, I.V., Wemmer, D.E. and Kim, S.-H. “Structural Characterization of the Reaction Pathway in Phosphoserine Phosphatase: Crystallographic ‘Snapshots’ of Intermediate States” J. Mol. Biol. 319, 421-431 (2002).
156. Westler, W.M., Frey, P.A., Lin, J., Wemmer, D.E., Morimoto, H., Williams, P.G. and Markley, J.L. “Evidence for a Strong Hydrogen Bond in the Catalytic Dyad of Transition State Analog Inhibitor Complexes of Chymotrypsin from Proton-Triton NMR Isotope Shifts” J. Am. Chem. Soc. 124, 4196-97 (2002).
155. Havlin, R.H., Laws, D.D., Bitter, H.-M.L., Sanders, L.K., Sun, H., Grimley, J.S., Wemmer, D.E., Pines, A. & Oldfield, E. “An Experimental and Theoretical Investigation of the Chemical Shielding Tensors of 13Ca of Alanine, Valine and Leucine Residues in Solid Peptides and in Proteins in Solution” J. Am. Chem. Soc. 123, 10362-69 (2001).
154. Rai, P., Cole, T.D., Wemmer, D.E. & Linn, S. “Differences in the conformation of bases within a duplex ATGA sequence explain preferential cleavage by Fe2+ and H2O2: Studies by Nuclear Magnetic Resonance Spectroscopy” J.Mol.Biol. 312, 1089-1101 (2001).
153. Spence, M.M., Rubin, S.M., Dimitrov, I.E., Ruiz, E.J., Wemmer, D.E., Pines, A., Yao, S.Q., Tian, F. & Schultz, P.G. “Functionalized Xenon as a Biosensor” Proc.Natl.Acad.Sci. 98, 10645-10657 (2001).
152. Rubin, S.M., Spence, M.M., Dimitrov, I.E., Ruiz, E.J., Pines, A. & Wemmer, D.E. “Detection of a Conformational Change in Maltose Binding Protein by 129Xe NMR” J.Am.Chem.Soc. 123, 8616-17 (2001).
151. Laws, D.D., Bitter, H.-M.L., Ball, H.L., Prusiner, S.B., Wemmer, D.E. & Pines, A.  “Solid-state NMR Studies of the Secondary Structure of Peptides Comprising Residues 89-143 of the Prion Protein” Proc.Natl.Acad.Sci. 98, 11686-11690 (2001).
150. Rubin, S.M., Spence, M.M., Wemmer, D.E. & Pines, A. “Characterization of the Effects of Nonspecific Xenon-Protein Interactions on 129Xe Chemical Shifts in Aqueous Solution: Further Development of Xenon as a Biomolecular Probe” J. Magn. Res. 152, 79-86 (2001).
149. Cho, H., Wang, W., Kim, R., Yokota, H., Damo, S., Kim, S.-H., Wemmer, D.E., Kustu, S. & Yan, D. “BeF3- acts as a phosphate analog in proteins phosphorylated on aspartate: structure of a BeF3- complex with phosphoserine phosphatase” Proc. Natl. Acad. Sci. 98, 8525-8530 (2001).
148. Zhang, Q., Harada, K., Cho, H.S., Frankel, A. and  Wemmer, D.E. “Structural Characterization of the Complex of the Rev Response Element RNA with a Selected Peptide” Chem. & Biol. 8, 511-520 (2001).
147.  Lee, S.-Y., Cho, H.S., Pelton, J.G., Yan, D., Berry, E. & Wemmer, D.E. “Crystal Structure of Activated CheY: Comparison with other Activated Receiver Domains” J. Biol. Chem. 276, 16425-16431 (2001).
146. Volkman, B.F., Lipson, D., Wemmer, D.E. & Kern, D. “Two-State Allosteric Behavior in a Single-Domain Signaling Protein” Science 291, 2429-2433 (2001).
145.  Cave, J.W., Cho, H.S., Batchelder, A.M., Yokota, H., Kim, R. & Wemmer, D.E. “Solution NMR Structure of a Protein Disulfide Oxidoreductase from Methanococcus jannaschii” Prot. Sci. 10, 384-396 (2001).
144. Hawkins, C.A., Watson, C., Gong, B. & Wemmer, D.E. “Structural analysis of the binding modes of minor groove ligands comprised of disubstituted benzenes” Nuc. Acids Res. 29, 936-942 (2001).
143. Bastos, M., Pease, J.H.B., Wemmer, D., Murphy, K.P. and Connelly, P.R. “Thermodynamics of the Helix-Coil Transition.  The Binding of S15 and a Hybrid Sequence, Disulfide Stabilized Peptide to the S-Protein” Proteins: Str. Funct. Gen. 42, 523-530 (2001).
142.  Lee, S.-Y., Cho, H.S., Hastings, C., Pelton, J.G., Yan, D., Henderson, R.K., Huang, L.-S., Kustu, S., Berry, E.A. & Wemmer, D.E. “Crystal structure of an activated response regulator bound to its target” Nature Str. Biol.  8, 52-56 (2001).
141. Cave, J.W., Kermer, W. and Wemmer D.E. “Backbone dynamics of sequence specific recognition and binding by the Yeast Pho4 bHLH domain probed by NMR” Prot. Sci. 9, 2354-2365 (2000).
140.  Rogers, J.P., Pemberton-Goodman, K., Harty, P., Luginbühl, P., Wemmer, D.E. & Stevens, R.C. “Structure-Activity Relationships in a Peptidic a7 Nicotinic Acetylcholine Receptor Agonist” J. Mol. Biol. 304, 911-926 (2000).
139.  Liu, K., Cho, H.S., Hoyt, D.W., Nguyen, T., Olds, P., Kelly, J.W. & Wemmer, D.E. “Deuterium-Proton Exchange on the Native Wild-Type Transthyretin Tetramer Identifies the Stable Core of the Individual Subunits and Indicates Mobility at the Subunit Interface” J. Mol. Biol. 303, 555-565 (2000).
138.  Liu, K., Cho, H.S., Lashuel, H.A., Kelly, J.W. & Wemmer, D.E. “A glimpse of a possible amyloidogenic intermediate of transthyretin” Nature Str Biol. 7, 754-757 (2000).
137. Rubin, S.M., Spence, M.M., Goodson, B.M., Wemmer, D.E. and Pines, A. “Evidence of Nonspecific Surface Interactions Between Laser-Polarized Xenon and Myoglobin in Solution” Proc.Natl.Acad.Sci. 97, 9472-5 (2000).
136. Bolvig, S., Hansen, P.E., Morimoto, H.M., Wemmer, D.E. & Williams, P.G. “Primary Tritium and Deuterium Isotope Effects on Chemical Shifts of Compounds Having an Intramolecular Hydrogen Bond”  Magn. Res. Chem. 38, 525-535 (2000).
135. Hawkins, C.A., de Clairac, R.P., Dominey, R.N., Baird, E.E., White, S., Dervan, P.B. & Wemmer, D.E. “Controlling Binding Orientation in Hairpin Polyamide DNA Complexes” J.Am.Chem.Soc. 122, 5235-5243 (2000).
134.  Cho, H.S., Lee, S.-Y., Yan, D., Pan, X., Parkinson, J.S., Kustu, S., Wemmer, D.E. and Pelton, J.G. “NMR Structure of Activated CheY” J. Molec. Biol. 297, 543-551 (2000).
133. Robertson, S.A., Harada, K., Frankel, A.D. & Wemmer, D.E. “Structure Determination and Binding Kinetics of a DNA Aptamer-Argininamide Complex” Biochem. 39, 946-954 (2000).
132. Keating, K.A., Myers, J.D., Pelton, J.G., Bair, R.A., Wemmer, D.E. and Ellis, P.D. “Development and Use of a Virtual NMR Facility” J. Magn. Reson. 143, 172-183 (2000).
131. Kern, D., Volkman, B.F., Luginbühl, P., Nohaile, M.J., Kustu, S. and Wemmer, D.E. “Structure of a transiently phosphorylated switch in bacterial signal transduction” Nature 402, 894-898 (1999).
130. Yan, D., Cho, H.S., Hastings, C.A., Lee, S.-Y., Pelton, J.G., Stewart, V., Wemmer, D.E. and Kustu, S. “Beryllofluoride mimics phosphorylation of NtrC and other bacterial response regulators”  Proc. Natl. Acad. Sci. 96, 14789-14794 (1999).
129. Bolvig, S., Hansen, P.E., Wemmer, D. and Williams, P.G. “Deuterium Isotope Effects on 17O Chemical Shifts of Intramolecularly Hydrogen Bonded Systems” J. Struct. Chem. 509, 171-181 (1999).
128. Pelton, J.G., Kustu, S. and Wemmer, D.E. “Solution Structure of the DNA Binding Domain of NTRC with Three Alanine Substitutions” J. Molec. Biol. 292, 1095-1110 (1999).
127.  Cho, C.Y., Liu, C.W., Wemmer, D.E. and Schultz, P.G.  “Cyclic and linear oligocarbamate ligands for human thrombin” Bioorg. Med. Chem. 7, 1171-1179 (1999).
126.  Rogers, J.P., Luginbühl, P., Stevens, R.C. and Wemmer, D.E. “NMR Solution Structure of a-Conotoxin ImI and Comparison to other Conotoxins Specific for Neuronal Nicotinic Acetylcholine Receptors” Biochem. 38, 3874-3882 (1999).
125.  Peteranderl, R., King, D., Rabenstein, M.D., Shin, Y.-K., Liu, C.W., Wemmer, D.E. & Nelson, H.C.M. “Biochemical and Biophysical Characterization of the Trimerization Domain from the Heat Shock Transcription Factor” Biochem. 38, 3559-3569 (1999).
124.  de Clairac, R.P.L., Seel, C.J., Geierstanger, B.H., Mrksich, M., Baird, E.E., Dervan, P.B. & Wemmer, D.E. "NMR Characterization of the Aliphatic b/b Pairing for Recognition of A•T/T•A Base Pairs in the Minor Groove" J.Am.Chem.Soc. 121, 2956-2964 (1999).
123.  Driggers, E.M., Liu, C.W., Wemmer, D.E. & Schultz, P.G. “Structure of the Michaelis Complex of an Efficient Antibody Acyl Transferase Determined by Transferred-NOESY” J.Am.Chem.Soc. 120, 7395-7396 (1998).
122.  Gehring, K. Zhang, X, Hall, J., Nikaido, H. & Wemmer D.E. “An NMR Study of Ligand Binding by Maltodextrin Binding Protein” Biochem. & Cell Biol. 76, 189-176 (1998).
121.  Cho, C.Y., Youngquist, R.S., Paikoff, S.J., Beresini, M.H., Hebert, A.R., Liu, C.W., Wemmer, D.E., Keough, T. & Schultz, P.G. “Synthesis and Screening of Linear and Cyclic Oligocarbamate Libraries.  Discovery of High Affinity Ligands for GPIIb/IIIa” J.Am.Chem.Soc. 120, 7706-7718 (1998).
120.  Driggers, E.M., Cho, H.S., Liu, C.W., Katzka, C.P., Braisted, A.C., Ulrich, H.D., Wemmer, D.E. & Schultz, P.G.  “Mechanistic Studies of an Antibody-Catalyzed Pericyclic Rearrangement” J.Am.Chem.Soc. 120, 1945-1958 (1998).
119.  Lee, A.L., Volkman, B.F., Robertson, S.A., Rudner, D.Z., Barbash, D.A., Cline T.W., Kanaar, R., Rio, D.C. and Wemmer, D.E.  “Chemical Shift Mapping of the RNA-Binding Interface of the multiple-RBD Protein Sex-Lethal”  Biochem. 36, 14306-14317 (1997).
118.  Nohaile, M.J., Kern, D., Volkman, B.F., Steadman, K.S., Kustu, S. and Wemmer, D.E. “Conformational Changes in the NTRC Receiver Domain Upon Activation”  J.Mol.Biol. 273, 299-316 (1997).
117.  Hofmann, M., Acedo, M., Fagan, P., Wemmer, D., Eritja, R. & Diaz, A.R. “Synthesis of oligodeoxynucleotides containing N6-[13C-methyl]adenine and N2-[13C-methyl]guanine” J.Chem.Soc. Perkin Trans.  1, 1825-1828 (1997).
116.  Austin, R.E., Maplestone, R.A., Sefler, A.M., Liu, K., Hruzewicz, W.N., Liu, C.W., Cho, H.S., Wemmer, D.E. & Bartlett, P.A.  “A Template for Stabilization of a Peptide a-Helix: Synthesis and Evaluation of Conformational Effects by Circular Dichroism and NMR” J.Am.Chem.Soc. 119, 6461-6472 (1997).
115.  Heller, J., Laws, D.D., King, D.S., Wemmer, D.E., Pines, A., Havlin, R.H., and Oldfield, E. “Determination of dihedral angles in peptides through experimental and theoretical studies of alpha carbon chemical shielding tensors”  J.Am.Chem.Soc. 119, 7827-7831 (1997).
114.  Volkman, B.F. & Wemmer, D.E.  "Deletion of a Single Amino Acid Changes the Folding of an Apamin Hybrid Sequence Peptide to that of Endothelin" Biopolymers 41, 451-460 (1997).
113. de Clairac, R.P.L., Geierstanger, B.H., Mrksich, M., Parks, M.E., Dervan, P.B. & Wemmer, D.E. "NMR Characterization of Designed "Hairpin" Peptide Complexes with the Minor Groove of DNA" J.Am.Chem.Soc.  119, 7909-7916 (1997).
112. Braun, J., Schwesinger, R., Williams, P.G., Morimoto, H., Wemmer, D.E. & Limbach, H.-H. "Kinetic H/D/T Isotope and Solid State Effects on the Tautomerism of the Conjugate Porphyrin Monoanion" J.Am.Chem.Soc. 118, 11101-11110 (1996).
111. Heller, J., Kolbert, A.C., Larsen, R., Ernst, M., Livshitz, T., Baldwin, M., Prusiner, S.G., Pines, A. & Wemmer, D.E. "Solid-State NMR Studies of the Prion Protein H1 Fragment" Prot. Science 5, 1655-61 (1996).
110. Jaiswal, D.K., Morimoto, H., Trump, E.L., Williams, P.G. & Wemmer, D.E. "Synthesis of High Specific Activity Tritium Labelled [2-3H]-Adenosine-5'-Triphosphate"  J. Labeled Cmpd. Radiopharm. 38, 743-52 (1996).
109. Heller, J., Larsen, R., Ernst, M., Kolbert, A.C., Baldwin, M., Prusiner, S.B., Wemmer, D.E. & Pines, A.  "Application of Rotational Resonance to Inhomogeneously Broadened Systems" Chem. Phys. Lett. 251, 223-9 (1996).
108. Kubinec, M.G., Culf, A.S., Cho, H., Lee, D.C., Burkham, J., Morimoto, H., Williams, P.G. & Wemmer, D.E. "Applications of Tritium NMR to Macromolecules: A Study of Two Nucleic Acid Molecules" J. Biomol. NMR. 7, 236-246 (1996).
107.  Braun, J., Limbach, H.-H., Wemmer, D.E., Morimoto, H. & Williams, P.G.  "Observation of Kinetic Tritium Isotope Effects by Dynamic NMR : The Tautomerism of Porphyrin"  J.Am.Chem.Soc. 118, 7231-32 (1996).
106.  Fagan, P.A., Fàbrega, C., Eritja, R., Goodman, M.F. & Wemmer, D.E. "An NMR Study of the Conformation of the 2-Aminopurine:Cytosine Mismatch in DNA"  Biochem. 35, 4026-4033 (1996).
105.  Geierstanger, B.H., Mrksich, M., Dervan, P.B. & Wemmer, D.E. "Extending the Recognition Site of Designed Minor Groove Binding Molecules" Nature Structural Biology, 3, 321-324 (1996).
104.  Fagan, P.A., Spielmann, H.P., Sigurdsson, S.Th., Hopkins, P.B. & Wemmer, D.E.  "An NMR Study of [d(CGCGAATTCGCG)]2 containing an Interstrand Cross-Link Derived from a Distamycin Pyrrole Conjugate"  Nuc. Acids Res. 24, 1566-73 (1996).
103.  Cho, H.S., Liu, C.W., Damberger, F.F., Pelton, J.G., Nelson, H.C.M., & Wemmer, D.E. "Yeast Heat Shock Transcription Factor Activation Domains are Unstructured as Probed by Heteronuclear NMR Spectroscopy" Protein Science 5, 262-269 (1996).
102.  Damberger, F.D., Pelton, J.G., Liu, C., Cho, H., Harrison, C.J., Nelson, H.C.M. & Wemmer, D.E.  "Refined Solution Structure of the DNA-binding Domain of the Heat Shock Factor from Kluyveromyces lactis" J. Molec. Biol. 254, 704 (1995).
101.  Liu, H., Spielmann, H.P., Ulyanov, N.A., Wemmer, D.E. & James, T.L. "Interproton Distance Bounds from 2D-NOE Intensities: Effect of Experimental Noise and Peak Integration Errors" J.Biomol. NMR. 6, 390 (1995).
100.  Kanaar, R., Lee, A.L., Rudner, D.Z., Wemmer, D.E. & Rio, D.C.  "Interaction of the Sex-lethal RNA binding domains with RNA" EMBO Journal 14, 4530 (1995).
99.  Spielmann, H. P., Dwyer, T. J., Hearst, J.E. & Wemmer, D.E. "The Solution Structures of Psoralen Monoadducted and Crosslinked DNA Oligomers by NMR Spectroscopy and Restrained Molecular Dynamics"  Biochem. 34, 12937 (1995).
98.  Spielmann, H.P., Wemmer, D.E., Jacobsen, J.P. "The Solution Structure of a DNA Complex with the Fluorescent bis-intercalator TOTO determined by NMR Spectroscopy" Biochemistry 34, 8542 (1995).
97. Jacobsen, J.P., Pedersin, J.B., Hansen, L.F. & Wemmer, D.E. "Site selective bis-intercalation of a homodimeric thiazole orange dye in DNA oligonucleotides" Nuc. Acids Res. 23, 753 (1995).
96.  Spielmann, P.H., Dwyer, T.J., Sastry, S., Hearst, J.E. & Wemmer, D.E. "DNA Structural Reorganization Upon Conversion of a Psoralen Furanside Monoadduct to an Interstrand Cross-Link: Implications for DNA Repair" Proc. Natl. Acad. Sci. 92, 2345 (1995).
95.  Rentzeperis, D., Marky, L.A., Dwyer, T.J., Geierstanger, B.H., Pelton, J.G. & Wemmer, D.E. "Interaction of Minor Groove Ligands to an AAATT/TTTAA Site: Correlation of Thermodynamic Characterization and Solution Structure"  Biochemistry 34, 2937 (1995).
94. Volkman, B.F., Nohaile, M.J.,Amy, N., Kustu, S., Wemmer, D.E. "Three-Dimensional Solution Structure of the N-Terminal Receiver Domain of NTRC" Biochemistry 34, 1413 (1995).
93.  Spielmann, H.P., Fagan, P.A., Bregant, T.M., Little, R.D., Wemmer, D.E. "The Binding Modes of a Rationally Designed Photoactivated DNA Nuclease Determined by NMR" Nuc. Acids Res. 23, 1576 (1995).
92.  Lee, A.L., Kanaar, R., Rio, D.C., Wemmer, D.E. "Resonance Assignments and Solution Structure of the Second RNA-Binding Domain of Sex-lethal Determined by Multidimensional Heteronuclear Magnetic Resonance" Biochemistry 33, 13775 (1994).
91.  Geierstanger, B.H., Mrksich, M., Dervan, P.B., Wemmer, D.E. "Design of a G•C Specific DNA Minor Groove Peptide"  Science 266, 646 (1994).
90.  Acedo, M., Fabrega, C., Avinó, Goodman, M., Fagan, P., Wemmer, D.E., Eritja, R.  "A Simple Method for N-15 Labeling of Exocyclic Amino Groups in Synthetic Oligdeoxynucleotides" Nuc. Acids Res. 22, 2983 (1994).
89. Damberger, F.D., Pelton, J.G., Harrison, C., Nelson, H.C.M. & Wemmer, D.E. "Solution Structure of the DNA Binding Domain of the Heat Shock Transcription Factor Determined by NMR" Protein Science 3, 1806 (1994).
88. Geierstanger, B.H., Volkman, B.F., Kremer, W. and Wemmer, D.E. "Short Peptide Fragments Derived from HMG-I/Y Proteins Bind Specifically to the Minor Groove of DNA"  Biochemistry 33, 5347 (1994).
87. Zhou, H.X., Lyu, P.C., Wemmer, D.E. & Kallenbach, N.R. "Structure of a C terminal alpha helix cap in a synthetic peptide" J.Am.Chem.Soc. 116, 1139 (1994).
86. Singh, S.B., Ajay, Wemmer, D.E. & Kollman, P.A. "Relative Binding Affinities of Distamycin and its Analog to d(CGCAAGTTGGC):d(GCCAACTTGCG).  Comparison of the theoretical predictions with the experimental results"   Proc.Natl.Acad.Sci. 91, 7673 (1994).
85. Dwyer, T.J., Geierstanger, B.H., Mrksich, M., Dervan, P.B., Wemmer, D.E. "Structural Analysis of Covalent Peptide Dimers, Bis(Pyridine-2-carboxamide-netropsin)(CH2)3-6, in Complex with 5'-TGACT-3' Sites by Two-Dimensional NMR"  J.Am.Chem.Soc. 115, 9900 (1993).
84.  Pagel, M.D. and Wemmer, D.E. "Solution Structure of a Minimal Sequence Peptide Derived from Scyllatoxin"  Proteins: Str. Funct. Genet. 18, 205 (1994).
83. Geierstanger, B.H., Jacobsen, J.P., Mrksich, M., Dervan, P.B. and Wemmer, D.E. "Structural and Dynamic Characterization of Heterodimeric and Homodimeric Complexes of Distamycin and 1-Methylimidazole-2-carboxamide-netropsin bound to the Minor Groove of DNA"  Biochem. 33, 3055 (1994).
82. Zhou, H.X., Lyu, P.C., Wemmer, D.E. and Kallenbach, N.R. "Alpha Helix Initiation in Synthetic Model Peptides by a Capping Box" Proteins: Str., Funct. Genetics 18, 1 (1994).
81. Emsley, L., Dwyer, T.J., Spielmann, H.P., Wemmer, D.E. "Determination of Conformational Features in DNA from Selective Two-Dimensional NMR Experiments" J.Am.Chem.Soc. 115, 7765 (1993).
80. Highsmith, S., Kubinec, M., Jaiswal, D.K., Morimoto, H., Williams, P.G., Wemmer, D.E. "[2-3H]ATP Synthesis and 3H-NMR Spectroscopy of Enzyme Nucleotide Complexes: ADP and ADP,Vi bound to myosin subfragment 1" J.Biomol.NMR 3, 325-334 (1993).
79. Lyu, P.C., Wemmer, D.E., Zhou, H.X., Pinker, R.J., Kallenbach, N.R. "Capping interactions in isolated a-helices: position dependent substitution effects and structure of a serine capped peptide helix" Biochem. 32, 421 (1993).
78. Geierstanger, B.H., Dwyer, T.J., Bathini, Y., Lown, J.W. & Wemmer, D.E. "NMR Characterization of a Heterocomplex Formed by Distamycin A and its Analog 2-ImD with d(CGCAAGTTGGC):d(GCCAACTTGCG). The 1:1:1 Heterocomplex is Favored over either 2:1 Homocomplex" J.Am.Chem.Soc. 115, 4474 (1993).
77.  Sastry, S.S., Spielmann, H.P., Dwyer, T.J., Wemmer, D.E. & Hearst, J.E. "Recent advances in the synthesis and structure determination of site specifically psoralen-modified DNA oligonucleotides"  J. Photochem.Photobiol. B: Biol., 14, 65-79 (1992).
76. Wemmer, D.E., Wedemayer, G.J. & Glazer, A.N. "Phycobilins of Cryptophycean Algae: Novel Linkage of Dihydrobiliverdin in a Phycoerythrin 555 and a Phycocyanin 645"  J.Biol.Chem. 268, 1658 (1993).
75. Kubinec, M.G. & Wemmer, D.E. "Solution NMR of Water on Protein Surfaces" Current Opinion in Structural Biology, 2, 828 (1992).
74. Kubinec, M.G. & Wemmer, D.E. "NMR Evidence for DNA Bound Water in Solution" J.Am.Chem.Soc. 114, 8739-8740 (1992).
73. Ellman, J.A., Volkman, B., Mendel, D., Schultz, P.G. & Wemmer, D.E. "Site-Specific Isotope Labeling of Proteins for NMR Studies"  J.Am.Chem.Soc. 114, 7959-7960 (1992).
72. Mrksich, M., Wade, W.S., Dwyer, T.J., Geierstanger, B.H., Wemmer, D.E. & Dervan, P.B. "Antiparallel Side-By-Side Dimeric Motif for Sequence Specific Recognition in the Minor Groove of DNA by the Designed Peptide 1-Methyl-imidazole-2-carboxamide-netropsin"  Proc.Natl.Acad.Sci. 89, 7586 (1992).
71. Storrs, R.W., Truckses, D. & Wemmer, D.E. "Helix Propagation in Trifluoroethanol Solutions" Biopolymers 32, 1695 (1992).
70. Lyu, P.C., Zhou, H., Jelveh, N., Wemmer, D.E. & Kallenbach, N.R. "Position-Dependent Stabilizing Effects in a-Helices: N Terminal Capping in Synthetic Model Peptides"  J.Am.Chem.Soc. 114, 6560 (1992).
60. Tomic, M.T., Somoza, J.R., Wemmer, D.E., Park, Y.W., Cho, J.M. & Kim, S.-H. "Secondary Structure and General Topology of Single-Chain-Monellin in Solution as Determined by Proton 2D NMR Spectroscopy"  J.Biol.NMR 2, 557 (1992).
68. Gaillard, J., Albrand, J.-P., Moulis, J.-M. & Wemmer, D.E. "Sequence-Specific Assignments of the 1H NMR Spectra of Reduced High Potential Ferredoxin (HiPIP) from Chromatium vinosm" Biochem. 31, 5632 (1992).
67. Rye, H.S., Yue, S., Wemmer, D.E., Quesada, M.A. Haugland, R.P., Mathies, R.A. & Glazer, A.N. "Stable fluorescent complexes of double-stranded DNA with bis-intercalating asymmetric cyanine dyes.  Properties and applications"  Nucleic Acids Research, 20, 2803 (1992).
66. Dwyer, T.J., Geierstanger, B.H., Bathini, Y., Lown, J.W. & Wemmer, D.E. "Design and Binding of a Distamycin A Analog to d(CGCAAGTTGGC):d(GCCAACTTGCG): Synthesis, NMR Structure and Implications for the Design of Sequence-Specific Minor Groove Binding Oligopeptides" J.Am.Chem.Soc. 114, 5911 (1992).
65. Wedemayer, G.J., Kidd, D.G., Wemmer, D.E. & Glazer, A.N. "Occurrence of Dihydrobiliverdin and Mesobiliverdin in Cryptomonad Biliproteins" J.Biol.Chem. 267, 7315 (1992).
64. Werner, M.H. & Wemmer D.E. "Identification of a Protein Binding Surface by Differential Amide Proton Exchange Measurements: Application to Bowman-Birk Serine Protease Inhibitor" J.Mol. Biol. 225, 873 (1992).
63. Amaratunga, M., Snowden-Ifft, E.A., Wemmer, D.E. & Benight, A.S. "Studies of DNA Dumbbells II: Construction and Characterization of DNA Dumbbells with a Sixteen Base-Pair Duplex Stem and Tn End-Loops (n=2,3,4,6,8,10,14)" Biopolymers 32, 865 (1992).
62. Fagan, P. & Wemmer, D.E. "Cooperative Binding of Distamycin-A to DNA in the 2:1 Mode"  J.Am.Chem.Soc. 114, 1080 (1992).
61. Werner, M.H. & Wemmer, D.E. "The Three-Dimensional Structure of Soybean Trypsin/Chymotrypsin Bowman-Birk Inhibitor in Solution" Biochem. 31, 999 (1992).
60. Wemmer, D.E. "The applicability of NMR methods to solution structure of nucleic acids" Current Opinion in Structural Biology 1, 452 (1991).
59. Kallick, D.A. and Wemmer, D.E. "1H NMR of 5'CGCGTATATACGCG 3', A Duplex and a Four-Membered Loop" Nucleic Acids Research 19, 6041 (1991).
58. McIntire, W.S., Wemmer, D.E., Chistoserdov, A., Lidstrom, M.E. "A New Cofactor in Prokaryotic Enzymes: Tryptophan Tryptophylquinone as the Redox Cofactor in Methylamine Dehydrogenase"  Science 252, 817 (1991).
57. Wedemayer, G.J., Wemmer, D.E. and Glazer, A.N. "Phycobilins of Cryptophycean Algae: Structures of Novel Bilins with Acryloyl Substituents from Phycoerythrin 566", J.Biol.Chem. 266, 4731 (1991).
56. Werner, M.H. and Wemmer, D.E. "1H-Assignments and Secondary Structure Determination of the Soybean Trypsin/Chymotrypsin Bowman-Birk Inhibitor"  Biochemistry 30, 3356 (1991).
55. Gehring, K., Williams, P.G., Pelton, J.G., Morimoto, H, Nikaido, H. and Wemmer, D.E. "Tritium NMR spectroscopy of ligand binding to maltose-binding protein" Biochemistry 30, 5524 (1991).
54. Janes, S.M., Mu, D., Wemmer, D.E., Smith, A.J., Kaur, S., Maltby, D., Burlingame, A.L. & Klinman, J.P., "A New Redox Cofactor in Eukaryotic Enzymes: Identification of 6-Hydroxydopa at the Active Site of Bovine Serum Amine Oxidase" Science 248, 981 (1990).
53. Pelton, J.G. and Wemmer, D.E. "Structure and Dynamics of Distamycin A with d(CGCAAATTGGC): d(GCCAATTTGCG) at Low Drug:DNA Ratios"  J.Biomolec.Stereodyn. 8, 81 (1990). 
52. Pease, J.H.B., Storrs, R.W. and Wemmer, D.E. "Folding and Activity of Hybrid Sequence, Disulfide Stabilized Peptides" Proc.Natl.Acad.Sci. 87, 5643 (1990).
51. Pease, A.C. and Wemmer, D.E. "Characterization of the Secondary Structure and Melting of a Self-Cleaved RNA Hammerhead Domain by 1H NMR Spectroscopy"   Biochem. 29, 9039 (1990).
50. Snowden-Ifft, E.A. and Wemmer, D.E. "Characterization of the Structure and Melting of DNAs Containing Backbone Nicks and Gaps" Biochem. 29, 6017 (1990).
49. Pelton, J.G. and Wemmer, D.E. "Binding Modes and Structure of Complexes of CGCAAATTTGCG with Distamycin-A" J.Am.Chem.Soc. 112. 1393 (1990).
48. Pelton, J.G. and Wemmer, D.E. "Structural Characterization of a 2:1 Distamycin A - d(CGCAAATTGGC) Complex by Two-Dimensional NMR"  Proc. Natl. Acad. Sci. 86, 5723 (1989).
47. Pease, J.H.B., Kumar, N.V., Schweitz, H. and Wemmer, D.E. "NMR Studies of Toxin III from the Sea Anemone Radianthus paumotensis and Comparison of Its Secondary Structure with Related Toxins"  Biochem. 28, 2199 (1989).
46. Kintanar, A, Huang, W.-C., Schindele, D.C., Wemmer, D.E. and Drobny, G. "Dynamics of Bases in Hydrated d[(CGCGAATTCGCG)2]", Biochem. 28, 282 (1989).
45. Pease, J.H.B. and Wemmer, D.E. "Solution Structure of Apamin by NMR and Distance Geometry"  Biochem. 27, 8419 (1988).
44. Kumar, N.V., Pease, J.H.B., Schweitz, H. and Wemmer, D.E. "Solution Structure of Sea Anemone Toxins by NMR", in Marine Toxins: Origin, Structure and Molecular Pharmacology, Eds. S. Hall & G. Strichartz, A.C.S. Symposium Series 418, 290-303  (1990).
43. Kleanthous, C., Wemmer, D.E. and Schachman, H. "The Role of an Active Site Histidine in the Catalytic Mechanism of Aspartate Transcarbamylase"  J.Biol.Chem. 263, 13062 (1988).
42. Kintanar, A., Alam, T.M., W.-C. Huang, Schindele, D.C., Wemmer, D.E. & Drobny, G., "Solid State 2H NMR Investigation of Internal Motion in 2'-Deoxythymidine"  J. Amer. Chem. Soc. 110, 6367 (1988).
41. Williams, P.G., Morimoto, H. & Wemmer, D.E., "Application of Modern 3H NMR Techniques to Analysis of Complex Isotopic Products from Hydrogenations"  J. Amer. Chem. Soc. 110, 8038 (1988).
40. Pelton, J.G. and Wemmer, D.E. "Structural Modelling of the Distamycin-A d(CGCGAATTCGCG)2 Complex Using 2D NMR and Molecular Mechanics"  Biochem. 27, 8088 (1988).
39. Wittebort, R.J., Usha, M.G., Ruben, D.J., Wemmer, D.E. and Pines, A. "Observation of Molecular Reorientation in Ice by Proton and Deuterium Magnetic Resonance" J. Amer. Chem. Soc. 110, 5668 (1988).
38. Kumar, N.V., Wemmer, D.E. and Kallenbach, N.R.  "Structure of P401 (Mast Cell Degranulating Peptide) in Solution"   Biophys. Chem. 31, 113 (1988).
37. Benight, A.S., Schurr, J.M., Flynn, P.F., Reid, B.R. and Wemmer, D.E.  "Melting of a Self-complementary DNA Minicircle" J. Mol. Biol. 200, 377 (1988).
36. Tomic, M.T., Wemmer, D.E. and Kim, S.-H. "Structure of a Psoralen Cross-linked DNA in Solution Determined by Two-dimensional NMR"  Science 238, 1722 (1987).
35. Srivenugopal, K.S., Wemmer, D.E. and Morris, D.R., "Aggregation of DNA by analogs of spermidine; enzymatic and structural studies" Nuc. Acids Res. 15, 2563 (1987).
34. Wemmer, D.E., Kumar, N.V., Metrione, R.M., Lazdunski, M., Drobny, G. and Kallenbach, N.R.  "NMR Analysis and Sequence of Toxin II from the Sea Anemone Radianthus paumotensis" Biochemistry 25, 6842 (1986).
33. Klevit, R.E., Wemmer, D.E. and Reid, B.R.  "1H NMR Studies on the Interaction Between Distamycin A and a Symmetrical DNA Dodecamer"  Biochemistry 25, 3296 (1986).
32. Wemmer, D.E. and Benight, A.S. "Preparation and Melting of Single Strand Circular DNA Loops" Nuc. Acids Res. 13, 8611 (1985).
31. Klevit, R.E., Blumenthal, D.R., Wemmer, D.E. and Krebs, E.G. "Interaction of Calmodulin and a Calmodulin-Binding Peptide From Myosin Light Chain Kinase: Major Structural Changes in Both Occur as the Result of Complex Formation"  Biochemistry 24, 8152 (1985).
30. Wemmer, D.E., Wand, A.J., Seeman, N.C. and Kallenabach, N.R. "NMR Analysis of DNA Junctions: Imino Proton NMR Studies of Individual Arms and Intact Junction"  Biochemistry 24, 5745 (1985).
29. Weber, P.L., Wemmer, D.E. and Reid, B.R. "1H NMR Studies of Lambda Cro Repressor  2. Sequential Resonance Assignments of the 1H NMR Spectrum"  Biochemistry 24, 4553 (1985).
28. Wemmer, D.E., Srivenugopal, K.S., Reid, B.R. and Morris, D.R. "Studies on Polyamine Binding to a Defined DNA Sequence by Nuclear Magnetic Resonance Spectroscopy"  J. Mol. Biol. 185, 457 (1985).
27. Hare, D.R., Ribeiro, N.S., Wemmer, D.E. and Reid, B.R.  "Complete Assignments of the Imino Protons of E. coli Valine Transfer RNA: Two-Dimensional NMR Studies in Water"  Biochemistry 24, 4300 (1985).
26. Wemmer, D.E., Chou, S.-H., Hare, D.R. and Reid, B.R. "Duplex-Hairpin Transitions in DNA: NMR Studies on CGCGTATACGCG"  Nuc. Acids. Res. 13, 3755 (1985).
25. Langowski, J., Fujimoto, B.S., Wemmer, D.E., Benight, A.S., Drobny, G., Shibata, J.H. and Schurr, J.M.  "Deformational Dynamics and NMR Relaxation of Supercoiled DNA"  Biopolymers 24, 1023 (1985).
24. Wemmer, D.E., Chou, S.-H. and Reid, B.R. "Sequence Specific Recognition of DNA.  NMR Assignments and Structural Comparison of Wild-type and Mutant Lambda OR3 DNA"  J. Mol. Biol. 180, 41 (1984).
23. Wemmer, D.E., Chou, S.-H., Hare, D.R. and Reid, B.R.  "Sequence Specific Recognition of DNA.  Assignment of Nonexchangable Proton Resonances in the Consensus Pribnow Promoter DNA Sequence by Two-dimensional NMR" Biochemistry 23, 2262 (1984).
22. Chou, S.-H., Wemmer, D.E., Hare, D.R. and Reid, B.R. "Sequence Specific Recognition of DNA.  Synthesis and NMR Studies of the Imino Protons of an RNA Polymerase Promoter"  Biochemistry 23, 2257 (1984).
21. Roberts, J.K.M., Wemmer, D. and Jardetzky, O. "Measurement of Mitochondrial ATPase Activity in Maize Root Tips by Saturation Transfer 31P Nuclear Magnetic Resonance"  Plant Physiology 74, 632 (1984).
20. Roberts, J.K.M., Callis, J., Wemmer, D., Walbot, V. and Jardetzky, O.  "The Mechanism of Cytoplasmic pH Regulation in Hypoxic Maize Root Tips and its Role in Survival Under Hypoxia"  Proc. Natl. Acad. Sci. USA 81, 3379 (1984).
19. Hare, D.R., Wemmer, D.E., Chou, S.-H., Drobny, G. and Reid, B.R. "Assignment of the Nonexchangable Proton Resonances of d(CGCGAATTCGCG) Using Two-dimensional NMR Methods"  J. Mol. Biol. 171, 319 (1983).
18. Chou, S.-H., Hare, D.R., Wemmer, D.E. and Reid, B.R. "Sequence-Specific Recognition of Deoxyribonucleic Acid.  Chemical Synthesis and Nuclear Magnetic Resonance Assignment of the Imino Protons of Lambda Phage OR3 Operator Deoxyribonucleic Acid" Biochemistry 22, 3037 (1983).
17. Mai, M.T., Wemmer, D.E. and Jardetzky, O.  "Effects of Hydration on the Dynamics of DNA"  J. Am. Chem. Soc. 105, 7149 (1983).
16. Wemmer, D. and Kallenbach, N.R. "The Structure of the Bee Venom Peptide Apamin Studied by Two-dimensional NMR"  Biochemistry 22, 1901 (1983).
15. Wemmer, D., Petrouleas, V., Panagiotopoulos, N., Filippakis, S.E. and Lemmon, R.M.  "High Resolution Solid State NMR and X-ray Structure Study of Choline Chloride, Bromide and Iodide" J. Phys. Chem. 87, 999 (1983).
14. Roberts, J.K.M., Wemmer, D., Ray, P. and Jardetzky, O. "Regulation of Cytoplasmic and Vacuolar pH in Maize Root Tips Under Different Experimental Conditions"   Plant Physiology 69, 1344 (1982).
13. Gonzales-Mendez, R., Wemmer, D., Hahn, G., Wade-Jardetzky, N.G. and Jardetzky, O.  "Continuous Flow NMR Culture System for Mammalian Cells"  Biochim. Biophys. Acta 720, 274 (1982).
12. Wemmer, D., Wade-Jardetzky, N.G. Robin, E. and Jardetzky, O. "Changes in the Phosphorous Metabolism of a Diving Turtle Observed by 31P NMR"  Biochim. Biophys. Acta 720, 281 (1982).
11. Wemmer, D.E., Whitehurst, D.D. and Pines, A. 13C NMR Studies of Coal and Coal Extracts"  Phil. Trans. R. Soc. (London) A300, 15 (1981).
10. Ribeiro, A.A., Wemmer, D., Bray, R.P. and Jardetzky, O. "A Folded Structure for the lac-repressor Headpiece"  Biochem. Biophys. Res. Comm. 99, 668 (1981).
9. Hogan, M., Wemmer, D., Bray, R.P., Wade-Jardetzky, N.G. and Jardetzky, O. "On the Interaction of the lac-repressor Headpiece with Nucleic Acids"  FEBS Letters 124, 202 (1981).
8. Wemmer, D., Shvo, H, Ribeiro, A.A., Bray, R.P. and Jardetzky, O.,  "High Resolution Proton Nuclear Magnetic Resonance Studies of the Exchangeable Resonances of the lac-repressor Headpiece"  Biochemistry 20, 3351 (1981).
7. Ribeiro, A.A., Wemmer, D., Bray, R.P. and Jardetzky, O., "pH Dependence of the High Resolution Proton Nuclear Magnetic Resonance Spectrum of the lac-repressor Headpiece"  Biochemistry 20, 3346 (1981).
6. Ribeiro, A.A., Wemmer, D., Bray, R.P., Wade-Jardetzky, N.G. and Jardetzky, O.,  "High Resolution NMR Studies of the lac-repressor:III Unfolding of the lac-repressor Headpiece"  Biochemistry 20, 829 (1981).
5. Ribeiro, A.A., Wemmer, D., Bray, R.P., Wade-Jardetzky, N.G. and Jardetzky, O.,"High Resolution NMR Studies of the lac-repressor:II Partial Analysis of the Aliphatic Region of the lac-repressor Headpiece Spectrum"  Biochemistry 20, 823 (1981).
4. Ribeiro, A.A., Wemmer, D., Bray, R.P., Wade-Jardetzky, N.G. and Jardetzky, O.,"High Resolution NMR Studies of the lac-repressor:I Assignments of Tyrosine Resonances in the N-terminal Headpiece" Biochemistry 20, 818 (1981).
3. Wemmer, D.E., Ruben, D.J. and Pines, A., "NMR Study of Molecular Reorientation under Fivefold Symmetry - Solid Permethylferrocene"  J. Am. Chem. Soc. 103, 28 (1981).
2. Wemmer, D.E. and Pines, A., "Carbon-13 Chemical Shifts in Solid Metal Sandwich Compounds"  J. Am. Chem. Soc. 103, 34 (1981).
1. Wemmer, D.E., Wolff, E.K. and Mehring, M., "Multiple Frequency Excitation (MFE), a Technique for Observing Broadline Transients" J. Mag. Reson. 42, 460 (1981).